Category Archives: Electron microgaphs of lung

Various species of mammal and maybe a non mammal now and then have been obtained and examine using routine transmission electron microscopy. These are summary images.

Vertical and middle layer organization in alveolar type II cell surfactant protein granules

Vertical and middle band banding in alveolar type II cell surfactant protein granules is shown here (hopefully this is SP-A). Using the same image as posted as the quintessential surfactant protein granule in alveolar type II cells, the image has been copied, inverted, and offset just a few pixels, to cast a shadow and give dimension to the “edges” in the image, a kind of embossing technique.

Embossing vertically highlights the bumpiness of ribosomes and other protein “lumps” within the granule, while embossing by moving the inverted image below, causes the ribosomes to appear to be concave.  Both accentuate different features (see below). The embossing upward as well as moving the inverted image a few pixels to the left highlight the banding seen within the granule which is secondary to the electron dense bands that run parallel to the long dimension of the granule… the vertical lines are not present in the surrounding cytoplasm, thereby indicating that the vertically lines within the granule are not section artifact or fixation artifact but actually a part of the specific alignment of the granule proteins.  The third image is a flattened image, cropped, increased in brightness and contrast, then vertical lines were superimposed where I saw definition.  Ribosomes, as an internal control for magnification are about the size of the red marker (27 nm estimated diameter), black line of 300 nm = the height of the three banding periods comprising this particular granule, 100 nm bars mark out the middle dense layer (with the blue dots where periodicity shows up) and also shows that about 4-5 protein densities occur in the middle layer of each 100 nm period.

Original ferret alveolar type II cell RER granule electron micrograph, untouched, from which these processed images were derived can be found here.

Negative 9879 block 23494 ferret # 16, untreated. Electron micrograph of an alveolar type II cell with a surfactant protein granule (which in some ways is similar to other collectin, c-type lectin, style granules, where organization of these proteins is highly oligomerized–e,g, Birbeck granules).  Embossed upward, and down ward images below. Bottom image is a cropped and enlarged from middle image, showing vertical lines which may be 4 or 5 per 100 nm and can transcend all three periods of this granule; ribosomes (as a size marker of @27 nm); periodicity of the medium dense layer of this granule (blue dots and 100 nm bar marker).

quintessential_SP_granule_shadowed-1quintessential_SP_granule_shadowed-2vertical-banding

 

 

 

Alveolar type II cell granule in ferret – electron microscopy

More on the periodicity of the dense outer bands of the alveolar type II cell surfactant granule.  Still think this is probably surfactant protein A. I have been assessing the densities in the darker outer bands, which are rounded molecular complexes, much more clearly seen on the tangential plane (yesterday’s images), and which looks to be something over 30 nm in diameter (using an adjacent ribosome as the size reference), and only two (with space between) appear in any 100 nm stretch.  The punctate nature of the lighter bands in this granule seemed to be more like 5-7 per 100 nm, so there is an obvious difference, both in size and in spacing of these two entities. How do they knit together into the granule?.

Dense bands are more continuous than dotted, particularly views perpendicular to the length of banding, but I would suspect that differences in the appearance of dense band periodicity has to do with the way the proteins denature depending upon the constituents of the fixation fluid, whether more or less calcium is present, or whether it is more hypertonic, or isoosmolar, but this is conjecture.

Figure below shows the intermittent densities in a perpendicular cut, unlike the post yesterday which showed the dense band densities on a tangential cut (and more pronounced). Figures below are arranged thus:

  1. quintessential alveolar type II cell surfactant protein granule UNRETOUCHED- Electron micrograph shows a granule with three linear periods and a ballooned end. Diameter of one ribosome is taken to be 27 nm, one period 100 nm (vertical black bar marker) therefore the whole granule here is approximately 300 nm in height (thickness). TOP
  2. quintessential alveolar type II cell surfacant protein granule with ribosomes which are on growing ends (and in this particular image, on the balloon end, and a couple of ribosomes on the opposite end, with membrane without ribosomes parallel to the long axis of banding. Ribosomes are PINK – and – the
  3. quintessential alveolar type II cell surfactant protein granule itself, is BLUE
  4. measurements of periodicity in dense as well as light bands BOTTOM, with green line over green dots (representing about 15 nm diameter punctate periodicity for lighter bands and red line over red dots (30+ nm diameter) showing periodicity of dense band protein molecules.

quintessential_SP_granulequintessential_SP_granule_overlay-1quintessential_SP_granule_overlay-2

Alveolar type II cell intra-RER protein organization: ferret, more hexagonal structures

Alveolar type II cell intra-RER protein organization: ferret, more hexagonal structures per the last two posts, there is more order here,  actual linear densities perpendicular to the long axis of the layered granule, and these blend out into the tangential plane as hexagonal structures with a central dense area (either 1 or 2 dots — in this case mostly 1 dot).

Top electron microgr9855_23349_ferret_17aph (unretouched, except to show the bounding box of the inset image) is an enlargement from a negative (9855) of a ferret type II cell, of just one of the layered granules present which is particularly well suited to examination of its tangential-orientation and detection of patterns that might indicate that it is surfactant protein A.

Bottom electron micrograph is inset, enlarged, and the patterning perpendicular to the long axis of the granule layering (here, tangentially cut) is seen, and the erase tool has been used to outline what could be hexagonal patterns for the surfactant protein A 18-mer bouquet.  You are free to decide if this looks right. My question is that they are small, but also would represent just 1/4 of the 100 nm width of the real pattern-period, of mirrored and stacked (4 molecules) of SP-A 18-mers. I have not highlighted all the vertical lines, nor have i highlighted all the hexagonal structures.

9855_23349_ferret_17-inset

 

 

 

 

Alveolar type II cell intra-RER protein organization: ferret

hexagonal_proteins_in_alveolar_type_II_cellsMore tangential sections of RER layered protein from ferret alveolar type II cells seen with electron microscopy. I have chosen one of the more easily identifiable granules with the light portion of the banding ‘periods’ spread out so that any order seen on from the “top down” might be highlighted.  I have outlined in red (this is a “partial erase” in photoshop, against a red (and green) layer), no other manipulation of the micrograph has occurred.

The red outlines are pretty obvious hexagonal structures, seemingly mostly with a central dense area, but way to often for chance, two central dots.  I have seen this so many times that it becomes necessary to call attention to it, and likely it means something in the organization of this surfactant protein (which I am calling surfactant protein A). On the other hand, the size of a ribosomes in these micrographs would make the hexagons a little too small….  maybe only 75- 80 nm across, so this is an issue to reconcile.

Red outlines, within the tangentially spread inbetween layers), green outlines, an area which might be still within this particular RER profile, but might actually be cytoplasmic.  I have compared the incidence of cytoplasmic heaxagonal structures, there are some, no question, and I don’t want to read more into the hexagonal molecular organization than is warranted.  To me however, it is significantly greater within the membrane of the RER when tangentially sectioned as happened here, and the previous post (same animal, same micrograph, same magnification, different site.

 

Factors that may influence granule layering patterns in alveolar type II cells

The granule in the alveolar type II cell of guinea pig, ferret and dog is unique, in that it appears to have wonderful shapes, concentric, U-shaped, linear, branching (even highly branching mostly at perpendicular planes to the original layering). I was trying to figure out what could cause such variation in shape. One keeps in mind that these are cross-sectional images, 2D of the 3D cytoplasmic granules, and therefore can be difficult to interpret as a whole granule.

To note first: there are often parallel “jets” (which I have called periods, just to be proper ) for the production of surfactant protein A (yep, I am calling it that with nothing but circumstantial evidence). Sometimes there are 10 or 15 such nidi of production, each perpendicular to the long axis of the layering (banding) and having about 4 ribosomes (the 4th ribosome in each period serves as the 1st in the adjacent layer).  The amount of resistance at the opposite end of the granule to protein synthesis, and the rate of protein synthesis (at the growing end(s) of the granule where the ribosomes are ) will determine whether this “jet” will spew out SP-A in an unhindered stream to create a linear granule or whether it will buckle, twist, spin or curl.

I began searching extrusion images on google, and these below (easily-found set of 6   extrusion images which illustrate the point) do a really good job of matching what is seen electron microscopically, of what becomes of the structure of protein layering during SP-A production when the protein produced meets with resistance.  Awesome… ha ha, a natural physical phenomenon, I will bet. What scientific journal will publish my diagram… ha ha, probably not.  Too funny.

extruded_soft_serve_polyethylene_pasta_model

Inner nuclear membrane: rigid and flexible portions

Nuclear membrane: rigid and flexible portions. I have noticed for some time that there are differences in the “lay” of the nuclear membrane (that is the inner nuclear membrane). There are stretches of inner nuclear membrane that are rigid looking, generally are devoid of condensed chromatin, still have the lamins present, but the protein groups attached or adjacent to the nuclear lamina of the inner nuclear membrane are spaced at a greater distance than the proteins in places of chromatin condensed along the inner nuclear membrane.  I found this particularly nice area in a guinea pig alveolar type II cell nucleus (which however had been exposed to vinyl chloride for a year), but this is a phenomenon not related to exposure but normal nuclear architecture. Cant wait to do more on this.

Below is an electron micrograph of an alveolar type II cell of a guinea pig, exposed as mentioned above to vinyl chloride, but this is just an image showing the inner nuclear membrane configuration which probably will end up being some kind of annulus around a nuclear pore complex, maybe part of the landscape that prevents condensation of chromatin in the nuclear pore area.

6476_M8005_gp_typeII_nuc_memb_stiff

Quick comparison: vinyl chloride exposure vs toluene diisocyanate in lung

Quick comparison: vinyl chloride exposure vs toluene diisocyanate in lung — alveolar type II cells in guinea pig. Not going into much detail, but just an observation after comparing two strains of guinea pig (Hartley and English short hair (males)) from two different experimental protocols, each having their own age matched controls (from experiments performed way back in the 1980s by Dr. Martha Radike and Dr. Stuart Brooks (respectively) and looking just quickly at hundreds of images of type II cells (looking in fact for surfactant protein granules – an entirely different study) I would say that vinyl chloride exposure did two things quite differently than toluene diisocyanate. I am not going to dig up the exposure protocols, days exposure and stuff because it is published somewhere, but vinyl chloride definitely caused an increase in the lamellar body size, and a concommitant decrease in the amount of RER and other organelles in the cytoplasm. Lamellar bodies got very large, caused indentations to nuclei and sometimes fused into these really large lumpy lamellar bodies. In addition mitochondria got large, had cristae deformed by some kind of matrix issue, the electron density was not decreased in the matrix, but cristae looked pushed and squeezed, in addition to an occasional fluting of the outer mitochondria membrane. (BTW, liver mitochondria from vinyl chloride exposed animals did show differences from unexposed as well). Figure from neg 6476, block M8005, anm# 51, vinyl chloride, low vitamin C. See below, two great nucleoli, several mitochondria with diminished cristae to mitochondrial ratio, enlarged matrix, and odd shapes within mitochondria.  The RER in the cytoplasm doesnt fig the granular layered profiles that have been seen in guinea pig that I am trying to establish as surfactant protein A, but are dilated and atypical for an alveolar type II cell from an untreated, and well, guinea pig.

6476_M8005_guinea_pig_typeII_VC_lowVitC

Toluene diisocyanate on the other hand (and some of the control animals along with… so you can judge whether this is an animal room sickness affecting all guinea pigs or something unknown) did NOT show mitochondrial or lamellar body size increase.

Mouse lung: liquid breathing E2

lymphocyte_plateletTwo archived electron micrographs from experiments in the 1970s which were part of liquid ventilation studies by Leland Clark, Jr.  These images are from a mouse that liquid breathed E2 (this is the hooker, I cannot find in my records what the chemical name for E2 is/was, but it is not what is currently searchable in google — what comes to mind is di fluoro methyl ether?).  This a mouse (typically swiss albino) was submerged in perfluorocarbon  for 15 min and tissues were taken at 0 min recovery.  Two micrographs of the dozen or so from this animal (I still have the Epon 812 blocks probably) and immediately I noticed two intravascular lymphocytes (probably medium size lymphocytes) making a quick pass by two platelets. One even has about 4 little surface folds reaching out to the lymphocyte.  I am not drawing any conclusions from two cells and two micrographs, but found it interesting, and would be highly surprised if something doesn’t point to this interaction, under some normal and experimental circumstances, as being significant.

 

Rat alveolar type II cell: just a nice electron micrograph

Rat alveolar type II cell, part of a nucleus , at least two nuclear pores (one a little tangentially sectiond, some good flattened cisternae of rough endoplasmic reticulum, lamellar bodies, polysomes, one coated vesicle (i think), some basolateral plasmalemma, collagen. One can see spacing of chromatin and or lamin proteins like little beads on a string… evne in the nuclear pore, perhaps two globular proteins right at the mouth of the pore ready to be polpped out into the cytoplasm.  See inset.

Rat, neg 9909, block 26538, 37500x enlargement 4 x.

rat_alveolar_type_II_cell_9909_26538

Cat (feline) alveolar type II cell RER: is this a layered granule

Cat (feline) alveolar type II cell RER: is this a layered granule in the RER? It has only about two of the characteristics of what I think is surfactant protein in the RER which is three species makes a highly layered secretion granule which fits a little nicely with a parallel arrangement of a four stack of surfactant protein A. (that is probably not the best way to describe it, but a vertical stack of two mirrored surfactant protein A groups, stacked again and then replicated side by side many times seems to fit what is seen in some granules). Rabbit alveolar type II cells have some indication that a similar RER granule might be present, other species, not so much.  Hamster and cat come close, but do not really fit well.  BUT case in point, here is an alveolar type II cell from a cat, which shows RER profiles with one of the important criteria for being called a surfactant protein granule, and that is the loss of ribosomes on the long axis of the granule (typically parallel to the layering) and the presence of stacked ribosomes  (seemingly 4 per period (one period being two outer dense layers and one central pretty much dense layer), one ribosome on the dense bands each, and two ribosomes on either side of the central band)…. so here just on the end of this profile of RER in the cat alveolar type II cell is a stack of 4 ribosomes, and then tangential off to the right is a series of 4 ribosomes stacked as well.  Image below and inset are not enhanced or photoshopped except to increase contrast slightly. dust and scratches remain.  bar = approximately 100 nm (determined from the presumed 27 nm (give or take) mammalian ribosome size.

cat_7268_24564_type_II_cell_RER